dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00301
Location and strand information: 370606 - 377850 (-)
Family: GH136|CBM32|GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9837
Protein molecular weight: 263629.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00302
Location and strand information: 378270 - 379814 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00303
Location and strand information: 379910 - 381736 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00304
Location and strand information: 381827 - 382645 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00305
Location and strand information: 382668 - 383549 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00306
Location and strand information: 383574 - 384872 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00307
Location and strand information: 385119 - 385769 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00308
Location and strand information: 385772 - 387037 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00309
Location and strand information: 387291 - 389492 (-)
Family: 2.A.6.4.2
Protein type: TC
Protein description: Protein translocase subunit SecDF

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00310
Location and strand information: 389574 - 390005 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00311
Location and strand information: 390236 - 390682 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00312
Location and strand information: 390787 - 392712 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.7526
Protein molecular weight: 73080.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00313
Location and strand information: 393055 - 393888 (-)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00314
Location and strand information: 393890 - 394795 (-)
Family: 3.A.1.1.19
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00315
Location and strand information: 394901 - 396262 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00316
Location and strand information: 396536 - 397702 (-)
Family: 3.A.1.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00317
Location and strand information: 397743 - 399254 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00318
Location and strand information: 399235 - 401076 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003147_1|CGC9
Gene ID: MGYG000003147_00319
Location and strand information: 401398 - 408408 (-)
Family: GH121
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4698
Protein molecular weight: 255096.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003147_00301	hypothetical protein	CAZyme	370606	377850	-	GH136\| CBM32\| GH20
MGYG000003147_00302	HTH-type transcriptional activator RhaR	TF	378270	379814	-	HTH_AraC+HTH_AraC
MGYG000003147_00303	hypothetical protein	TC	379910	381736	-	9.B.33.1.1
MGYG000003147_00304	L-arabinose transport system permease protein AraQ	TC	381827	382645	-	3.A.1.1.28
MGYG000003147_00305	L-arabinose transport system permease protein AraP	TC	382668	383549	-	3.A.1.1.28
MGYG000003147_00306	Multiple sugar-binding protein	TC	383574	384872	-	3.A.1.1.44
MGYG000003147_00307	hypothetical protein	null	385119	385769	-	RloB\| OLD-like_TOPRIM
MGYG000003147_00308	hypothetical protein	null	385772	387037	-	AAA_21
MGYG000003147_00309	Protein translocase subunit SecDF	TC	387291	389492	-	2.A.6.4.2
MGYG000003147_00310	hypothetical protein	null	389574	390005	-	No domain
MGYG000003147_00311	hypothetical protein	null	390236	390682	+	Cupin_2
MGYG000003147_00312	Non-reducing end beta-L-arabinofuranosidase	CAZyme	390787	392712	-	GH127
MGYG000003147_00313	L-arabinose transport system permease protein AraQ	TC	393055	393888	-	3.A.1.1.41
MGYG000003147_00314	Lactose transport system permease protein LacF	TC	393890	394795	-	3.A.1.1.19
MGYG000003147_00315	Cyclodextrin-binding protein	STP	394901	396262	-	SBP_bac_1
MGYG000003147_00316	hypothetical protein	TC	396536	397702	-	3.A.1.1.2
MGYG000003147_00317	Chemotaxis response regulator protein-glutamate methylesterase	TF	397743	399254	-	HTH_AraC
MGYG000003147_00318	hypothetical protein	TC	399235	401076	-	8.A.59.2.1
MGYG000003147_00319	hypothetical protein	CAZyme	401398	408408	-	GH121
Protein ID	Protein Name	Type	Start	End	Strand	Signature